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Table 1 General genomic characteristics of Mycoplasma haemocanis strain Illinois compared to members of pneumoniae group of mycoplasmas

From: Mycoplasma haemocanis – the canine hemoplasma and its feline counterpart in the genomic era

Characteristic

Pneumoniae Group

 

Hemoplasmas

M. pneumoniae

M. gallisepticum

M. genitalium

M. penetrans

 

M. haemocanis strain Illinois

M. haemofelis strain Ohio2

'Candidatus M. haemominutum' strain Birmingham 1

M. suis strain Illinois

    

Genome size (base pairs)

919 992

1 155 937

513 880

742 431

816 394

1 012 800

580 076

1 358 633

% of G + C

35.3

38.8

35.5

31.1

40

31

31.7

25.7

Total of genes

1207

1584

582

883

733

817

524

1069

Coding sequences (CDSs)

1173

1549

547

844

689

763

475

1037

CDSs with predicted function

286 (24.3%)

299 (19.3%)

219 (40%)

293 (34.7%)

333 (48.3%)

469 (61.46%)

323 (68%)

585 (56.4%)

No. of tRNAs

31

31

32

32

37

32

36

29

No. of rRNAs

        

 16S

1

1

1

1

1

2

1

1

 23S

1

1

1

1

1

2

1

1

 5S

1

1

1

1

1

3

1

1

Genes in paralogous families

748 (63.76%)

1103 (71.2%)

134 (24.5%)

361 (42.8%)

132 (19.1%)

110 (14.4%)

25 (5.2%)

245 (23.6%)

  1. Data was obtained from GenBank database using the following accession numbers: M. haemocanis strain Illinois (CP003199.1), M. haemofelis strain Ohio2 (CP002808), ‘Candidatus Mycoplasma haemominutum’ strain Birmingham 1 (HE613254.1), M. suis strain Illinois (CP002525), M. pneumoniae (U00089), M. gallisepticum (AE015450), M. genitalium (L43967), M. penetrans (BA000026). Paralogous gene families were assigned using BLASTclust, with 70% coverage and 30% sequence identity thresholds.