Figure 3

Venn diagrams showing differentially expressed genes as a function of time and stimulus. Upper row: all DEG. Lower row: up-regulated annotated genes only. The lists of the sets of genes up-regulated on exposure to both SaS and LPS are given. Venn diagrams composed with VENNY [38]. List of the 16 upregulated annotated genes shared in LPS 3 h and SaS 3 h: CCL20, CXCL8, IL6, CD83, CXCL1, NFKBIA, CXCL3, BIRC3, SLCO4A1, PLAUR, IER3, ARRDC4, CEBPD, SGK1, BTG3, GABARAPL1. List of the 22 upregulated annotated genes shared in LPS 6 h and SaS 6 h: CCL20, CXCL8, CXCL5, NOS2A, CCL2, CXCL2, CFB, SGK1, NFKBIA, CD83, ARRDC4, SLC25A28, SAT1, IKBKAP, GABARAPL1, CALCOCO2, PLAUR, LEPROT, DUSP1, TLR4, CEBPD, SNRNP27.