Table 6 Differences of nucleotide and deduced amino acid sequences between the porcine-like bovine K5 and porcine K71 strains, and between the bovine K5 and other porcine and porcine-like bovine strains.
Strain | Species | VP1 | VP2 | VP3 | VP4 | NSP2 | NSP3 | NSP5 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R1 | C1 | M1 | P[7] | N1 | E1 | H1 | ||||||||
| Â | Â | 377a | 2154 | 830 | 1063 | 1845 | 923 | 55 | 522 | 763 | 815 | 64 | 1032 | 7 |
(120)b | (712) | (272) | (349) | (599) | (305) | (3) | (159) | (239) | (257) | (13) | (3' UTR)e | (5' UTR)f | ||
K5 | Bovine | G(R) c | T(I) | T(S) | A(L) | G(S) | G(C) | A(E) | T(F) | T(D) | T(F) | C(S) | G | A |
K71 | Porcine | A(Q) | G(M) | C(P) | C(F) | A(N) | A(Y) | G(E) | C(S) | C(D) | C(L) | T(S) | A | T |
PRG942 | Porcine | A(Q) | T(I) | C(P) | A(L) | A(N) | –d | G(E) | T(F) | T(D) | T(F) | T(S) | A | T |
PRG9121 | Porcine | A(Q) | T(I) | C(P) | A(L) | A(N) | A(Y) | G(E) | T(F) | C(D) | T(F) | T(S) | A | T |
YM | Porcine | A(K) | T(I) | C(P) | A(L) | A(N) | A(Y) | G(E) | T(F) | T(D) | T(F) | A(S) | A | T |
Gottfried | Porcine | A(Q) | T(I) | C(P) | A(L) | A(N) | – | G(E) | T(F) | T(D) | T(F) | T(S) | A | A |
OSU | Porcine | A(Q) | T(I) | T(S) | A(L) | A(N) | A(Y) | G(E) | T(F) | T(D) | T(F) | T(S) | A | T |
A131 | Porcine | A(K) | T(I) | – | – | A(N) | A(Y) | G(E) | T(F) | T(D) | T(F) | T(S) | A | T |
A253 | Porcine | A(K) | T(I) | – | – | A(N) | A(Y) | G(E) | T(F) | T(D) | T(F) | T(S) | A | T |
K8 | Bovine | * g | * | * | * | * | * | G(E) | T(F) | T(D) | T(F) | T(S) | A | T |