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Table 1 Primers used in this study a

From: Isolation and characterization of a subtype C avian metapneumovirus circulating in Muscovy ducks in China

Name

Sequence (5′-3′)

Position

Target gene

N-F

5′ GGGACAAGTGAAAATGTCTCTTCAGGGGATTCA GCTTA 3′

41-77

N

N-R

5′ TTTTTAATTACTCATAATCATTCTGGCCT 3′

1235-1263

P-F

5′ GGGACAAGTCAAAATGTCCTTTCC 3′

1248-1271

P

P-R

5′ GTTTTTTATTAACTACATAGTAAGGGAGTATAG GTCATC 3′

2136-2174

M-F

5′ GGGGACAAGTIAAIATGGAGTC 3′

2157-2175

M

M-R

5′ GTCTTGGCTATCGCTACACC3′

3399-3418

F-F

5′ GGGACAAGTGAAAATGTCTTGG 3′

3208-3229

F

F-R

5′ TCTTCACTTGTCCCAATTTTTT 3′

4666-4687

M2SH-F

5′ TTGGGACAAGTGAAGATGTCTCG 3′

4672-4694

M2-SH

M2SH-R

5′ CTTGACTTTGACTTTAAGCTCCTG 3′

6186-6209

L1-F

5′ GGACCAAGTTAAAAATGGATCCAC 3′

7939-7962

L

L1-R

5′ TACACTCCTTCTGTTTCTGGAGG 3′

10006-10028

L2-F

5′ TGGCTGCATTTGACTGTTCCACT 3′

9951-9983

L

L2-R

5′ CACTAAGTCCAATTTGTCAGGG 3′

12068-12089

L3-F

5′ TACAGGCAGAAGCCCTAAACAAT 3′

11933-11955

L

L3-R

5′ GCAAAAAAACCGTATTCATCC 3′

14126-14146

G-F

5′ CAGCCAGGCAATCACACAACAGTTC 3′

5881-5904

G

G-R

5′ CCACTTTCGAAGTGTTATCCTTTTT 3′

8076-8099

  1. aPrimers according to available subgroup C aMPV Colorado strain, GenBank accession number: AY590688.