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Table 2 Results of the comparison between the sets of differentially expressed genes (DEG) and enriched Gene Ontology (GO) terms between Nagasaki recovered after 2 h incubation in lung explants (ex vivo) or recovered 2 h after intratracheal infection (in vivo)

From: Metatranscriptomics reveals metabolic adaptation and induction of virulence factors by Haemophilus parasuis during lung infection

Gene group

Unique ex vivo

Shared

Unique in vivo

DEGs UP

273

120

249

DEGs DOWN

273

99

74

GOs UP

74

5

46

GOs DOWN

68

115

102