From: Amplicon sequencing of bacterial microbiota in abortion material from cattle
Sample ID | Organ | Abortive agents isolated in pure culture | Most abundant genera found by NGS (≤ 75% of the reads) |
---|---|---|---|
13Ue197_Pl | PL | T. pyogenes | Fusobacterium (74.04%), Trueperella (11.28%), others (14.71%) |
13Ue755_Pl | PL | E. coli | Enterobacteriaceae a (94.2%), others (5.8%) |
13Ue1008_Pl | PL | V. metschnikovii | Vibrio (89.92%), others (10.08%) |
13Ue1137_Mg | AC | S. uberis | Streptococcus (99.62%), others (0.38%) |
13Ue1137_Pl | PL | S. uberis | Streptococcus (99.33%), others (0.67%) |
13Ue1143_Mg | AC | E. coli | Enterobacteriaceae a (99.17%), others (0.83%) |
13Ue1143_Pl | PL | E. coli | Enterobacteriaceae a (96.18%), others (3.82%) |
13Ue1275_Pl | PL | S. uberis | Streptococcus (37.24%), Enterobacteriaceaea (25.92%), Lactococcus (21.27%), others (15.57%) |
13Ue1450_Mg | AC | L. lactis | Lactococcus (86.52%), others (13.48%) |
14A26_Mg | AC | C. fetus subsp. fetus | Campylobacter (60.38%), Pseudomonas (36.03%), others (3.59%) |
14A26_Pl | PL | C. fetus subsp. fetus | Pseudomonas (98.97%), others (1.03%) |