Table 2 Variations in the protein-coding genes of WSSV-CN03 and -CN04
From: A VP24-truncated isolate of white spot syndrome virus is inefficient in per os infection
Genes | Function or structure | WSSV-CN03 | WSSV-CN04 | |
|---|---|---|---|---|
start–stop (aa) | Type of change | start–stop (aa) | ||
wsv001 | collagen-like | 1–4371 (1456) | Del: 183 aa | 1–3822 (1273) |
wsv002 | VP24, EP | 5041–4415 (208) | Del: 100 aa | 4216–3890 (108) |
wsv006 | 6366–5461 (301) | Del: 34 aa | 5439–4636 (267) | |
wsv073 | Missing | 35331–36599 (422) | ||
wsv089 | 43202–43660 (152) | Del: 64 aa | 43729–43995 (88) | |
wsv150 | 79052–78705 (115) | Ins: 32 aa | 79701–79258 (147) | |
wsv195 | Missing | 102534–103304 (258) | ||
wsv249 | E3 ligase, IE | 134655–136937 (760) | Del: 23 aa | 132892–135105 (737) |
wsv479 | 269533–269042 (163) | Ins: 126 aa | 266439–265570 (289) | |
wsv486 | 104783–102447 (778) | Missing | / | |