Table 2 Animal sample information of six DSN animals whose unmapped sequencing data showed the presence of Mycoplasma species. The assembly information includes the length of the assemblies generated from unmapped reads that could be mapped to the Mycoplasma species Candidatus Mycoplasma haemobos (full genome size = 935 638 bp) and Mycoplasma wenyonii (full genome size = 650 228 bp), the respective genome coverage, and the average k-mer depth of the respective assembly.
Mycoplasma species | Animal sample information | Assembly information | |||||||
|---|---|---|---|---|---|---|---|---|---|
Sex | Birth year | Tissue | Farm | Collection (year/month) | Number of scaffolds | Length (kb) | Genome coverage (%) | K-mer depth | |
Candidatus Mycoplasma haemobos | Cow | 2013 | Blood | 1 | 2015/10 | 168 | 670.04 | 71.6 | 4.90 |
Cow | 2014 | Blood | 1 | 2015/10 | 126 | 105.59 | 11.3 | 2.34 | |
Mycoplasma wenyonii | Cow | 2014 | Blood | 1 | 2015/10 | 27 | 218.93 | 33.7 | 4.06 |
Bull | 2014 | Blood | 1 | 2015/10 | 2 | 179.86 | 27.7 | 27.21 | |
Bull | 2015 | Blood | 1 | 2015/10 | 2 | 179.82 | 27.7 | 161.85 | |
Bull | 2015 | Blood | 1 | 2016/11 | 7 | 173.58 | 26.7 | 1768.83 | |