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Table 1 Primers used in this research.

From: Interleukin-2 enhancer binding factor 2 negatively regulates the replication of duck hepatitis A virus type 1 by disrupting the RNA-dependent RNA polymerase activity of 3D polymerase

Primers

Sequence (5′—3)a

Purpose

Genebank Access No.b

Primers for reverse transcription

 

 RT-ILF2-R

CTCCTGAGTCTCCATGCTCTCCTCTT

RT-PCR for ILF2

XM_038167928

Primers for plasmids construction

 

 ILF2-EcoRI-F

ccgGAATTCGGATGGCTTTCCCGCGGGTTA

pCMV-myc-ILF2

XM_038167928

 ILF2-XhoI-R

ccgCTCGAGTCACTCCTGAGTCTCCATGCTCT

 ILF2-HindIII-F

cccAAGCTTGCCACCATGGCTTTCCCGCGGGTTA

pCDNA3.1-ILF2

XM_038167928

 ILF2-BamHI-R

cgcGGATCCTCACTCCTGAGTCTCCATGCTCT

PBudCE-3D-ILF2

 ILF2-BamHI-F

cgcGGATCCATGGCTTTCCCGCGGGTTA

pET32-ILF2

XM_038167928

 ILF2-HindIII-R

cccAAGCTTTCACTCCTGAGTCTCCATGCTCT

 3D-BglII-F

ggaAGATCTGGGAAAGTAGTAAGCAAGCAATA

pCMV-HA-3D

MW462237

 3D-NotI-R

aagGCGGCCGCTTAGATCATCATGCAAGC

 3D-NotI-F

 3D-BglII-R

aagGCGGCCGCGGGAAAGTAGTAAGCAAGCAATA

ggaAGATCTTTAGATCATCATGCAAGC

PBudCE-3D

MW462237

 VP0-BamHI-F

cgcGGATCCATGGATACTCTTACCAAAAAC

pET32-vp0

MW462237

 VP0-XhoI-R

ccgCTCGAGCTGATTGTCAAATGGTCGGGGACAC

 3UTR-F

ACTGTTGGTCCGCAGGTACCATAAA

3′ UTR of DHAV-1

MW462237

 3UTR-R

AGGTAGGGTAGGGAATAGTAAA

 3UTR-reverse-F

AGGTAGGGTAGGGAATAGTAAAG

Reverse sequence of 3′ UTR of DHAV-1

MW462237

 3UTR-reverse-R

ACTGTTGGTCCGCAGGTACCATAAACC

Primers for qRT-PCR

 

 ILF2-qRTPCR-F

GCAGACGCTTGTCCGCATCC

qRT-PCR for ILF2

XM_038167928

 ILF2-qRTPCR-R

GGTTCCTCCTGGTTCTCCTCTTCC

 DHAV-qRT-PCR-F

AAACACCCACTGGCTTTGGA

qRT-PCR for DHAV-1

MW462237

 DHAV-qRT-PCR-R

GGTCCTCACGGAAAGTGGAG

 GAPDH-F

ATGTTCzGTGATGGGTGTGAA

qRT-PCR for GAPDH

XM_061080759.1

 GAPDH-R

CTGTCTTCGTGTGTGGCTGT

Primers for RNA interference

 

 siILF2 (sence)

UCAAUUUGCACCUCGAAAGUU

RNAi against ILF2

XM_038167928

 siILF2 (antisence)

GGUAGCAGAACGUCCCACAGC

 NC siRNA (sence)

UUCUCCGAACGUGUCACUUtt

Negative control siRNA

XM_038167928

 NC siRNA (antisence)

ACGUGACACGUUCGGAGAAtt

  1. aLowercase letters represent protective bases; Restriction sites are underlined.
  2. bThe primers used in this research were designed based on the relevant genes.